Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943064.1_cds_XP_016486353.1_77199
CDS Infomation

[gene=LOC107806665] [db_xref=GeneID:107806665] [protein=patellin-3-like] [protein_id=XP_016486353.1] [location=complement(join(43507..43761,43921..44071,44187..44311,44978..46018))] [gbkey=CDS]
Sequence

ATGGCTGATACAGCCCCACCAGAACATAACCTTCAGCCACCATCCACGGCTGAGGAAGAT
ACCCCACCCCCACCTCCACCACTAGCAGTAGAACCAACAGCAACTGAACCACCTCTTGCT
TCAGTTGAAGTTGAACCAGTGAAGCAAGAATCAGTAACAGAAGCTGTGGAACATCACCCT
GCTGTTACTGTAGTTGAAAAAGATACTCCTTTAACTGAGCCTTCACCGGAAGAACCAACT
CTGGTTGCAGCTGAACAGGTATCTGTTACTGTTCCTGAGAAAGAAGCAGAGGGTGTTAGT
GTTACTGAATCTGAGAAATCTAAACCAGCTGATGCGAAAAAGATCCCTGAATCTTTGGTT
TCATTCAAAGAAGAAAGTAATAAAGTCTCAGATCTATCTGATTCTGAGAGAAAATCACTT
GTAGAGTTCAAATTTCTTGTTCAAGAATCCATTAAAAATCAAACCTTTACTACTGGAACC
GCAGTTAAAACCCAAGAAACTCAAACCCCATCAACAGAAATTACTGATTTACCTCAGGAA
GTATCCATTTGGGGAATCCCACTATTGAAAGATGATAGGGCAGATGTGATTCTGCTCAAA
TTTCTTAGAGCTAGAGATTTCAAGGTTAAGGATTCATTTGCAATGTTAAAGAAGACAATT
TTATGGAGAAAGGAGTTTAACATTGAAGAGCTTGTAGATGAAGATCTTGGTGATGATCTT
GATAAGGTTGTGTTTATGCATGGTCATGATAAAGAGGGACATCCTGTTTGCTATAATGTG
TATGGAGAGTTTCAGAATAAGGAATTGTATAACAAAACCTTTGGAGATGAGGAGAAGAGG
AACAAGTTCTTGCGTTGGCGGATTCAGTTCTTGGAGAGAAGTATAAGGAAGTTGGATTTC
AATCCAGGTGGAATCAATACTATCTTTCAAGTTAGTGATCTCAAGAACTCTCCTGGTCCA
GGGAAGAGGGAGCTTCGGCTTGCTACTAGGCAGGCCTTGCATTTGCTTCAGGATAATTAT
CCTGAGTTCGTCGCTAAGCAGGTGTTCATCAATGTCCCTTGGTGGTATTTAGCTTTCTAC
ACAATGATCAGCCCATTCATGACCCAGAGAACAAAAAGCAAGTTTGTATTTGCTGGTCCA
TCAAAGACTGCAGAAACCCTTTACAAGTACGTATCTCCTGAGCAAGTACCTGTTCAATAT
GGGGGCCTCAGCGTTGATTACTGTGAATGCAATCCTGAGTTCACTGTCAATGATCCAGCC
ACTGAGATCATTGTAAAACCTGCAACAAAGCAGACCGTGGAGATCATTGTAAATGAGAAA
TGCATTATTGTCTGGGAGCTACGTGTATTGGGTTGGGATGTGACATATAGTGCTGAATAT
GTGCCGAATACAGACAGTGGATATACTGTTAACATACAGAAGCCTAGAAAGATGACGTCA
ACTGATGAACCTGTTGTTAGCAGCAGCTTCAAGATCGTTGAGCTAGGTAAGATACTTTTG
ACAATTGACAATCCTACGTCAAAGAAGAAGAAGCTTCTTTACAGGTACAAGGATAAGCCC
TATTCCGACTGA

Peptide Sequence

PEP ID

XP_016486353.1
PEP Infomation

PREDICTED: patellin-3-like [Nicotiana tabacum]
Sequence

MADTAPPEHNLQPPSTAEEDTPPPPPPLAVEPTATEPPLASVEVEPVKQESVTEAVEHHP
AVTVVEKDTPLTEPSPEEPTLVAAEQVSVTVPEKEAEGVSVTESEKSKPADAKKIPESLV
SFKEESNKVSDLSDSERKSLVEFKFLVQESIKNQTFTTGTAVKTQETQTPSTEITDLPQE
VSIWGIPLLKDDRADVILLKFLRARDFKVKDSFAMLKKTILWRKEFNIEELVDEDLGDDL
DKVVFMHGHDKEGHPVCYNVYGEFQNKELYNKTFGDEEKRNKFLRWRIQFLERSIRKLDF
NPGGINTIFQVSDLKNSPGPGKRELRLATRQALHLLQDNYPEFVAKQVFINVPWWYLAFY
TMISPFMTQRTKSKFVFAGPSKTAETLYKYVSPEQVPVQYGGLSVDYCECNPEFTVNDPA
TEIIVKPATKQTVEIIVNEKCIIVWELRVLGWDVTYSAEYVPNTDSGYTVNIQKPRKMTS
TDEPVVSSSFKIVELGKILLTIDNPTSKKKKLLYRYKDKPYSD

Transcript Sequence

Gene sequence data has not been registered.